STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOM78984.1Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
AOM78985.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.692
AOM76649.1
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.553
AOM78833.1
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.553
AOM77408.1
Catalase HPII; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.539
AOM78986.1
Short-chain dehydrogenase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.531
AOM80869.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
AOM78156.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
  
 
 0.507
AOM78983.1
Collagen-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.507
AOM79239.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.507
AOM77885.1
Bacillithiol system protein YtxJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.464
Your Current Organism:
Pedobacter steynii
NCBI taxonomy Id: 430522
Other names: CIP 109507, DSM 19110, P. steynii, Pedobacter steynii Muurholm et al. 2007, WB 2.3-45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.