STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE16746.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
SFE64629.1
PTS system, lactose-specific IIC component.
 
  
 0.785
SFE16722.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.639
SFE58687.1
6-phospho-beta-glucosidase.
 
 
 0.554
SFF07336.1
6-phospho-beta-glucosidase.
 
 
 0.547
SFE99600.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.510
SFE64609.1
PTS system, lactose-specific IIA component.
 
  
 0.475
SFF03444.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.471
SFF06832.1
PTS system, cellobiose-specific IIA component.
 
  
 0.461
SFF06904.1
PTS system, cellobiose-specific IIA component.
 
  
 0.461
SFE16771.1
Putative ABC transport system ATP-binding protein.
       0.447
Your Current Organism:
Trichococcus pasteurii
NCBI taxonomy Id: 43064
Other names: ATCC 35945, CCUG 37395, CIP 104580, DSM 2381, Lactosphaera pasteurii, Ruminococcus pasteurii, T. pasteurii, strain KoTa2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.