Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE23985.1 | SFE31274.1 | SAMN04488086_102108 | SAMN04488086_102346 | N-acetylmuramoyl-L-alanine amidase. | LysM repeat-containing protein. | 0.854 |
SFE23985.1 | SFE84746.1 | SAMN04488086_102108 | SAMN04488086_11267 | N-acetylmuramoyl-L-alanine amidase. | DUF4097 and DUF4098 domain-containing protein YvlB. | 0.536 |
SFE23985.1 | cinA | SAMN04488086_102108 | SAMN04488086_102378 | N-acetylmuramoyl-L-alanine amidase. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.901 |
SFE23985.1 | cmk | SAMN04488086_102108 | SAMN04488086_102345 | N-acetylmuramoyl-L-alanine amidase. | Cytidylate kinase. | 0.670 |
SFE23985.1 | guaA | SAMN04488086_102108 | SAMN04488086_10413 | N-acetylmuramoyl-L-alanine amidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.889 |
SFE23985.1 | guaB | SAMN04488086_102108 | SAMN04488086_1118 | N-acetylmuramoyl-L-alanine amidase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.891 |
SFE30932.1 | SFE31274.1 | SAMN04488086_102335 | SAMN04488086_102346 | Uncharacterized protein YpmB. | LysM repeat-containing protein. | 0.722 |
SFE30932.1 | SFE31347.1 | SAMN04488086_102335 | SAMN04488086_102348 | Uncharacterized protein YpmB. | Helix-turn-helix domain-containing protein. | 0.541 |
SFE30932.1 | SFE36001.1 | SAMN04488086_102335 | SAMN04488086_1034 | Uncharacterized protein YpmB. | Putative amino acid metabolism. | 0.651 |
SFE30932.1 | SFE38866.1 | SAMN04488086_102335 | SAMN04488086_103110 | Uncharacterized protein YpmB. | Thiamine transporter protein (Thia_YuaJ). | 0.480 |
SFE31274.1 | SFE23985.1 | SAMN04488086_102346 | SAMN04488086_102108 | LysM repeat-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.854 |
SFE31274.1 | SFE30932.1 | SAMN04488086_102346 | SAMN04488086_102335 | LysM repeat-containing protein. | Uncharacterized protein YpmB. | 0.722 |
SFE31274.1 | SFE31347.1 | SAMN04488086_102346 | SAMN04488086_102348 | LysM repeat-containing protein. | Helix-turn-helix domain-containing protein. | 0.737 |
SFE31274.1 | SFE36001.1 | SAMN04488086_102346 | SAMN04488086_1034 | LysM repeat-containing protein. | Putative amino acid metabolism. | 0.695 |
SFE31274.1 | SFE38866.1 | SAMN04488086_102346 | SAMN04488086_103110 | LysM repeat-containing protein. | Thiamine transporter protein (Thia_YuaJ). | 0.696 |
SFE31274.1 | SFE84746.1 | SAMN04488086_102346 | SAMN04488086_11267 | LysM repeat-containing protein. | DUF4097 and DUF4098 domain-containing protein YvlB. | 0.721 |
SFE31274.1 | cinA | SAMN04488086_102346 | SAMN04488086_102378 | LysM repeat-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.823 |
SFE31274.1 | cmk | SAMN04488086_102346 | SAMN04488086_102345 | LysM repeat-containing protein. | Cytidylate kinase. | 0.737 |
SFE31274.1 | guaA | SAMN04488086_102346 | SAMN04488086_10413 | LysM repeat-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.838 |
SFE31274.1 | guaB | SAMN04488086_102346 | SAMN04488086_1118 | LysM repeat-containing protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.810 |
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