STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE22902.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
SFE22881.1
Competence protein ComGD.
       0.785
SFE22808.1
Competence protein ComGA.
       0.716
SFE22831.1
Competence protein ComGB.
       0.716
SFE22854.1
Competence protein ComGC.
       0.716
SFE22926.1
Competence protein ComGF.
       0.706
SFE22955.1
Hypothetical protein.
       0.536
SFE22783.1
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains.
       0.476
Your Current Organism:
Trichococcus pasteurii
NCBI taxonomy Id: 43064
Other names: ATCC 35945, CCUG 37395, CIP 104580, DSM 2381, Lactosphaera pasteurii, Ruminococcus pasteurii, T. pasteurii, strain KoTa2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.