STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE44461.1Iron/zinc/copper transport system permease protein. (282 aa)    
Predicted Functional Partners:
SFE44433.1
Iron/zinc/copper transport system ATP-binding protein.
 
 0.999
SFE44489.1
Iron/zinc/copper transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
SFE11047.1
Zinc transport system ATP-binding protein.
 
 0.973
SFF11877.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.949
SFE11024.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.941
SFE64734.1
Zinc transport system substrate-binding protein.
  
 
 0.838
SFE40574.1
Iron (metal) dependent repressor, DtxR family.
 
 
 0.822
SFE11073.1
Zinc transport system permease protein.
  
  
 
0.769
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.733
SFE07550.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
   
  
 0.733
Your Current Organism:
Trichococcus pasteurii
NCBI taxonomy Id: 43064
Other names: ATCC 35945, CCUG 37395, CIP 104580, DSM 2381, Lactosphaera pasteurii, Ruminococcus pasteurii, T. pasteurii, strain KoTa2
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