STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE71762.11-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (588 aa)    
Predicted Functional Partners:
SFE25708.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.885
SFE14812.1
PTS system, beta-glucosides-specific IIC component.
     
 0.856
SFE28017.1
PTS system, beta-glucosides-specific IIC component.
     
 0.856
SFE76761.1
PTS system, sucrose-specific IIC component.
     
 0.856
SFE98075.1
Phosphotransferase system sugar-specific permease eiia type 1; PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family.
     
 0.856
SFE98677.1
PTS system, beta-glucosides-specific IIC component.
     
 0.856
SFE89088.1
Glycine/D-amino acid oxidase.
   
 
 0.708
SFE71787.1
DNA-binding transcriptional regulator, MerR family.
       0.668
SFF01551.1
Fructose-6-phosphate aldolase, TalC/MipB family.
    
 0.667
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
 
   
 0.657
Your Current Organism:
Trichococcus pasteurii
NCBI taxonomy Id: 43064
Other names: ATCC 35945, CCUG 37395, CIP 104580, DSM 2381, Lactosphaera pasteurii, Ruminococcus pasteurii, T. pasteurii, strain KoTa2
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