Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE54026.1 | SFE83422.1 | SAMN04488086_105108 | SAMN04488086_1125 | H+/Cl-antiporter ClcA. | Nucleotide-binding universal stress protein, UspA family. | 0.448 |
SFE54026.1 | groL | SAMN04488086_105108 | SAMN04488086_11229 | H+/Cl-antiporter ClcA. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.449 |
SFE77525.1 | SFE83422.1 | SAMN04488086_11052 | SAMN04488086_1125 | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Nucleotide-binding universal stress protein, UspA family. | 0.457 |
SFE83422.1 | SFE54026.1 | SAMN04488086_1125 | SAMN04488086_105108 | Nucleotide-binding universal stress protein, UspA family. | H+/Cl-antiporter ClcA. | 0.448 |
SFE83422.1 | SFE77525.1 | SAMN04488086_1125 | SAMN04488086_11052 | Nucleotide-binding universal stress protein, UspA family. | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.457 |
SFE83422.1 | SFE83441.1 | SAMN04488086_1125 | SAMN04488086_1126 | Nucleotide-binding universal stress protein, UspA family. | Acyl-CoA hydrolase. | 0.512 |
SFE83422.1 | SFE83459.1 | SAMN04488086_1125 | SAMN04488086_1127 | Nucleotide-binding universal stress protein, UspA family. | Malate dehydrogenase (oxaloacetate-decarboxylating). | 0.403 |
SFE83422.1 | groL | SAMN04488086_1125 | SAMN04488086_11229 | Nucleotide-binding universal stress protein, UspA family. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.432 |
SFE83422.1 | hpf | SAMN04488086_1125 | SAMN04488086_11247 | Nucleotide-binding universal stress protein, UspA family. | SSU ribosomal protein S30P/sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.464 |
SFE83441.1 | SFE83422.1 | SAMN04488086_1126 | SAMN04488086_1125 | Acyl-CoA hydrolase. | Nucleotide-binding universal stress protein, UspA family. | 0.512 |
SFE83441.1 | SFE83459.1 | SAMN04488086_1126 | SAMN04488086_1127 | Acyl-CoA hydrolase. | Malate dehydrogenase (oxaloacetate-decarboxylating). | 0.543 |
SFE83459.1 | SFE83422.1 | SAMN04488086_1127 | SAMN04488086_1125 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Nucleotide-binding universal stress protein, UspA family. | 0.403 |
SFE83459.1 | SFE83441.1 | SAMN04488086_1127 | SAMN04488086_1126 | Malate dehydrogenase (oxaloacetate-decarboxylating). | Acyl-CoA hydrolase. | 0.543 |
groL | SFE54026.1 | SAMN04488086_11229 | SAMN04488086_105108 | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | H+/Cl-antiporter ClcA. | 0.449 |
groL | SFE83422.1 | SAMN04488086_11229 | SAMN04488086_1125 | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Nucleotide-binding universal stress protein, UspA family. | 0.432 |
hpf | SFE83422.1 | SAMN04488086_11247 | SAMN04488086_1125 | SSU ribosomal protein S30P/sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Nucleotide-binding universal stress protein, UspA family. | 0.464 |