Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE23797.1 | SFF04682.1 | SAMN04488086_10298 | SAMN04488086_12221 | Putative N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.409 |
SFE23797.1 | SFF11396.1 | SAMN04488086_10298 | SAMN04488086_13013 | Putative N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily. | Exodeoxyribonuclease-3. | 0.493 |
SFF04682.1 | SFE23797.1 | SAMN04488086_12221 | SAMN04488086_10298 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | Putative N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily. | 0.409 |
SFF04682.1 | SFF11396.1 | SAMN04488086_12221 | SAMN04488086_13013 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.670 |
SFF04682.1 | cmk | SAMN04488086_12221 | SAMN04488086_102345 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | Cytidylate kinase. | 0.664 |
SFF04682.1 | der | SAMN04488086_12221 | SAMN04488086_102343 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.671 |
SFF04682.1 | scpB | SAMN04488086_12221 | SAMN04488086_102355 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.531 |
SFF04682.1 | truA-2 | SAMN04488086_12221 | SAMN04488086_12222 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.515 |
SFF11396.1 | SFE23797.1 | SAMN04488086_13013 | SAMN04488086_10298 | Exodeoxyribonuclease-3. | Putative N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily. | 0.493 |
SFF11396.1 | SFF04682.1 | SAMN04488086_13013 | SAMN04488086_12221 | Exodeoxyribonuclease-3. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.670 |
cmk | SFF04682.1 | SAMN04488086_102345 | SAMN04488086_12221 | Cytidylate kinase. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.664 |
cmk | der | SAMN04488086_102345 | SAMN04488086_102343 | Cytidylate kinase. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.990 |
cmk | scpB | SAMN04488086_102345 | SAMN04488086_102355 | Cytidylate kinase. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.818 |
der | SFF04682.1 | SAMN04488086_102343 | SAMN04488086_12221 | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.671 |
der | cmk | SAMN04488086_102343 | SAMN04488086_102345 | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Cytidylate kinase. | 0.990 |
der | scpB | SAMN04488086_102343 | SAMN04488086_102355 | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.611 |
scpB | SFF04682.1 | SAMN04488086_102355 | SAMN04488086_12221 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.531 |
scpB | cmk | SAMN04488086_102355 | SAMN04488086_102345 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Cytidylate kinase. | 0.818 |
scpB | der | SAMN04488086_102355 | SAMN04488086_102343 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.611 |
truA-2 | SFF04682.1 | SAMN04488086_12222 | SAMN04488086_12221 | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.515 |