STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF09895.11,3-propanediol dehydrogenase. (389 aa)    
Predicted Functional Partners:
SFE25708.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.939
SFE68240.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.896
SFE44718.1
Glutamate synthase (ferredoxin).
   
 
 0.878
SFE40539.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
0.704
SFF09957.1
Glycerol dehydrogenase.
  
 
 0.704
SFF09927.1
Dihydroxyacetone kinase, C-terminal domain.
     
 0.677
SFF09910.1
Dihydroxyacetone kinase, phosphotransfer subunit.
       0.675
SFE54724.1
NADP-dependent alcohol dehydrogenase.
  
  
 0.599
SFE14972.1
NADP-dependent alcohol dehydrogenase.
  
  
 0.589
SFF09729.1
Glycerol dehydratase reactivation factor, small subunit.
    
 0.531
Your Current Organism:
Trichococcus pasteurii
NCBI taxonomy Id: 43064
Other names: ATCC 35945, CCUG 37395, CIP 104580, DSM 2381, Lactosphaera pasteurii, Ruminococcus pasteurii, T. pasteurii, strain KoTa2
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