STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLM9_154Hypothetical protein. (139 aa)    
Predicted Functional Partners:
FLM9_153
Ferric siderophore transport system, periplasmic binding protein TonB.
 
 
 0.991
FLM9_156
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.989
FLM9_155
Biopolymer transport protein ExbD/TolR.
 
     0.912
FLM9_1627
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25).
   
 
 0.615
FLM9_152
NAD dependent epimerase/dehydratase.
       0.494
FLM9_1297
TonB-dependent hemin, ferrichrome receptor.
  
  
 0.482
Your Current Organism:
Synechococcus spongiarum
NCBI taxonomy Id: 431041
Other names: C. Synechococcus spongiarum, Candidatus Synechococcus spongiarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.