Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FLM9_197Signal peptide peptidase SppA (Protease IV) (EC 3.4.21.-). (273 aa)    
Predicted Functional Partners:
FLM9_198
Chorismate mutase II (EC 5.4.99.5); Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
       0.830
FLM9_196
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.672
FLM9_199
LSU ribosomal protein L34p.
       0.652
rnpA
Ribonuclease P protein component (EC 3.1.26.5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.535
FLM9_193
Cob(I)alamin adenosyltransferase (EC 2.5.1.17).
       0.489
FLM9_194
SAM-dependent methyltransferase sll0829 (UbiE paralog).
       0.489
FLM9_195
Phage integrase family.
       0.489
FLM9_192
Aldo/keto reductase family.
       0.461
FLM9_201
FIG137771: hypothetical protein.
       0.461
FLM9_202
Inner membrane protein translocase component YidC, short form OxaI-like.
  
  
 0.422
Your Current Organism:
Synechococcus spongiarum
NCBI taxonomy Id: 431041
Other names: C. Synechococcus spongiarum, Candidatus Synechococcus spongiarum
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