STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLM9_586Chloride channel protein. (419 aa)    
Predicted Functional Partners:
FLM9_585
Aconitate hydratase 2 (EC 4.2.1.3); Belongs to the aconitase/IPM isomerase family.
       0.812
FLM9_924
Hypothetical protein.
  
 
 0.721
purH
IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3).
    
 0.702
FLM9_642
Trk system potassium uptake protein TrkA.
  
  
 0.699
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
   
 0.685
FLM9_280
Thioredoxin reductase (EC 1.8.1.9).
  
 
 0.685
FLM9_270
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39).
     
 0.675
FLM9_1627
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25).
  
 
 0.671
FLM9_1042
Ferredoxin-dependent glutamate synthase (EC 1.4.7.1).
    
 0.656
FLM9_278
Glutamate synthase [NADPH] large chain (EC 1.4.1.13).
    
 0.656
Your Current Organism:
Synechococcus spongiarum
NCBI taxonomy Id: 431041
Other names: C. Synechococcus spongiarum, Candidatus Synechococcus spongiarum
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