STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLM9_731Allophycocyanin beta chain. (162 aa)    
Predicted Functional Partners:
FLM9_523
Phycobilisome core component.
  
 
 
0.999
FLM9_730
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 0.999
FLM9_732
Allophycocyanin alpha chain.
 
 
0.999
FLM9_938
Phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 0.999
FLM9_149
Phycobilisome rod-core linker polypeptide,phycocyanin-associated; Belongs to the phycobilisome linker protein family.
  
 
 
 0.989
FLM9_1522
Phycocyanin alpha chain.
  
 
0.923
FLM9_1523
Phycocyanin beta chain.
  
 
0.904
FLM9_45
Phycobilisome rod linker polypeptide,phycocyanin-associated; Belongs to the phycobilisome linker protein family.
  
 
 0.900
FLM9_1641
Phycobilisome rod-core linker polypeptide,phycocyanin-associated.
  
 
 
 0.891
FLM9_46
Phycobilisome phycoerythrin-associated linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 0.886
Your Current Organism:
Synechococcus spongiarum
NCBI taxonomy Id: 431041
Other names: C. Synechococcus spongiarum, Candidatus Synechococcus spongiarum
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