Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
FLM9_1003 | FLM9_270 | Nucleoside-diphosphate-sugar epimerases. | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | 0.951 |
FLM9_1003 | FLM9_31 | Nucleoside-diphosphate-sugar epimerases. | All-trans-phytoene synthase (EC 2.5.1.99). | 0.435 |
FLM9_1003 | FLM9_363 | Nucleoside-diphosphate-sugar epimerases. | Cytochrome P450. | 0.498 |
FLM9_1003 | FLM9_763 | Nucleoside-diphosphate-sugar epimerases. | Hypothetical protein. | 0.520 |
FLM9_1068 | FLM9_270 | Nucleoside-diphosphate-sugar epimerases. | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | 0.951 |
FLM9_1068 | FLM9_31 | Nucleoside-diphosphate-sugar epimerases. | All-trans-phytoene synthase (EC 2.5.1.99). | 0.435 |
FLM9_1068 | FLM9_363 | Nucleoside-diphosphate-sugar epimerases. | Cytochrome P450. | 0.498 |
FLM9_1068 | FLM9_763 | Nucleoside-diphosphate-sugar epimerases. | Hypothetical protein. | 0.520 |
FLM9_152 | FLM9_270 | NAD dependent epimerase/dehydratase. | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | 0.951 |
FLM9_152 | FLM9_31 | NAD dependent epimerase/dehydratase. | All-trans-phytoene synthase (EC 2.5.1.99). | 0.552 |
FLM9_152 | FLM9_363 | NAD dependent epimerase/dehydratase. | Cytochrome P450. | 0.563 |
FLM9_152 | FLM9_763 | NAD dependent epimerase/dehydratase. | Hypothetical protein. | 0.580 |
FLM9_1652 | FLM9_270 | UDP-sulfoquinovose synthase (EC 3.13.1.1). | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | 0.951 |
FLM9_1652 | FLM9_31 | UDP-sulfoquinovose synthase (EC 3.13.1.1). | All-trans-phytoene synthase (EC 2.5.1.99). | 0.435 |
FLM9_1652 | FLM9_363 | UDP-sulfoquinovose synthase (EC 3.13.1.1). | Cytochrome P450. | 0.498 |
FLM9_1652 | FLM9_763 | UDP-sulfoquinovose synthase (EC 3.13.1.1). | Hypothetical protein. | 0.520 |
FLM9_270 | FLM9_1003 | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | Nucleoside-diphosphate-sugar epimerases. | 0.951 |
FLM9_270 | FLM9_1068 | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | Nucleoside-diphosphate-sugar epimerases. | 0.951 |
FLM9_270 | FLM9_152 | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | NAD dependent epimerase/dehydratase. | 0.951 |
FLM9_270 | FLM9_1652 | Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39). | UDP-sulfoquinovose synthase (EC 3.13.1.1). | 0.951 |
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