Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FLM9_1177 | era | FLM9_1177 | FLM9_751 | Phosphate starvation-inducible protein PhoH,predicted ATPase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.492 |
FLM9_1177 | recO | FLM9_1177 | FLM9_943 | Phosphate starvation-inducible protein PhoH,predicted ATPase. | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.769 |
FLM9_1418 | FLM9_88 | FLM9_1418 | FLM9_88 | FIG01151898: hypothetical protein. | AbrB family transciptional regulator. | 0.763 |
FLM9_1418 | recO | FLM9_1418 | FLM9_943 | FIG01151898: hypothetical protein. | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.661 |
FLM9_88 | FLM9_1418 | FLM9_88 | FLM9_1418 | AbrB family transciptional regulator. | FIG01151898: hypothetical protein. | 0.763 |
FLM9_88 | recO | FLM9_88 | FLM9_943 | AbrB family transciptional regulator. | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.708 |
FLM9_942 | FLM9_944 | FLM9_942 | FLM9_944 | Deoxyribose-phosphate aldolase (EC 4.1.2.4); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Glycosyltransferase. | 0.699 |
FLM9_942 | FLM9_945 | FLM9_942 | FLM9_945 | Deoxyribose-phosphate aldolase (EC 4.1.2.4); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Modification methylase PaeR7I (EC 2.1.1.72). | 0.676 |
FLM9_942 | FLM9_946 | FLM9_942 | FLM9_946 | Deoxyribose-phosphate aldolase (EC 4.1.2.4); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Type II restriction enzyme PaeR7I (EC 3.1.21.4). | 0.676 |
FLM9_942 | hpf | FLM9_942 | FLM9_941 | Deoxyribose-phosphate aldolase (EC 4.1.2.4); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.788 |
FLM9_942 | recO | FLM9_942 | FLM9_943 | Deoxyribose-phosphate aldolase (EC 4.1.2.4); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.775 |
FLM9_944 | FLM9_942 | FLM9_944 | FLM9_942 | Glycosyltransferase. | Deoxyribose-phosphate aldolase (EC 4.1.2.4); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.699 |
FLM9_944 | FLM9_945 | FLM9_944 | FLM9_945 | Glycosyltransferase. | Modification methylase PaeR7I (EC 2.1.1.72). | 0.773 |
FLM9_944 | FLM9_946 | FLM9_944 | FLM9_946 | Glycosyltransferase. | Type II restriction enzyme PaeR7I (EC 3.1.21.4). | 0.773 |
FLM9_944 | hpf | FLM9_944 | FLM9_941 | Glycosyltransferase. | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.699 |
FLM9_944 | recO | FLM9_944 | FLM9_943 | Glycosyltransferase. | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.774 |
FLM9_945 | FLM9_942 | FLM9_945 | FLM9_942 | Modification methylase PaeR7I (EC 2.1.1.72). | Deoxyribose-phosphate aldolase (EC 4.1.2.4); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.676 |
FLM9_945 | FLM9_944 | FLM9_945 | FLM9_944 | Modification methylase PaeR7I (EC 2.1.1.72). | Glycosyltransferase. | 0.773 |
FLM9_945 | FLM9_946 | FLM9_945 | FLM9_946 | Modification methylase PaeR7I (EC 2.1.1.72). | Type II restriction enzyme PaeR7I (EC 3.1.21.4). | 0.945 |
FLM9_945 | hpf | FLM9_945 | FLM9_941 | Modification methylase PaeR7I (EC 2.1.1.72). | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.676 |
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