STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0R8X3_HYPJQPredicted protein. (679 aa)    
Predicted Functional Partners:
G0RK03_HYPJQ
Predicted protein.
    
 
 0.821
G0RTB7_HYPJQ
Predicted protein.
    
 
 0.821
G0RHW6_HYPJQ
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
     
 0.765
G0RH94_HYPJQ
Predicted protein.
     
 0.733
G0RWP7_HYPJQ
Ribosomal_L7Ae domain-containing protein.
     
 0.682
G0R772_HYPJQ
Predicted protein.
   
 
 0.644
G0R7F9_HYPJQ
Replication factor C, subunit 5-like protein.
     
 0.622
G0RQZ6_HYPJQ
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
     
 0.608
G0RBM1_HYPJQ
Predicted protein.
     
 0.601
G0RAY8_HYPJQ
Uncharacterized protein.
   
 0.597
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
Server load: low (24%) [HD]