STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mus8Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)    
Predicted Functional Partners:
G0R7B7_HYPJQ
E3 ubiquitin protein ligase.
    
 0.997
G0RAB8_HYPJQ
Predicted protein.
    
 0.997
G0RBR9_HYPJQ
Ubiquitin-activating enzyme; Belongs to the ubiquitin-activating E1 family.
   
 0.985
ubi4
Polyubiquitin.
   
 0.963
G0RM86_HYPJQ
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.958
G0RQ12_HYPJQ
Predicted protein.
   
 0.932
rpl40
Ubiquitin fusion protein.
   
 0.906
G0RM45_HYPJQ
Predicted protein.
    
 0.867
G0RE41_HYPJQ
Predicted protein.
  
 0.852
hh2b
Histone H2B; Belongs to the histone H2B family.
    
 0.840
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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