STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RC50_HYPJQOrnithine cyclodeaminase. (465 aa)    
Predicted Functional Partners:
G0R922_HYPJQ
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
 
  
 0.696
trp
Tryptophan synthase.
     
 0.668
argi
Arginase; Belongs to the arginase family.
  
 
 0.651
G0RA29_HYPJQ
Arginase/agmatinase/formimionoglutamate hydrolase; Belongs to the arginase family.
    
 0.649
G0RKD3_HYPJQ
Arginase/agmatinase/formimionoglutamate hydrolase; Belongs to the arginase family.
    
 0.649
G0R7Z5_HYPJQ
PUA domain-containing protein.
     
 0.632
G0R8R2_HYPJQ
Predicted protein.
      
 0.630
G0RGQ2_HYPJQ
Ornithine decarboxylase-like protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 0.613
G0RB77_HYPJQ
Predicted protein.
  
 
 0.520
G0RD69_HYPJQ
Predicted protein.
  
 
 0.520
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.