STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RCH0_HYPJQPredicted protein. (245 aa)    
Predicted Functional Partners:
G0RUB3_HYPJQ
Predicted protein.
   
 0.994
G0RR34_HYPJQ
Uncharacterized protein.
   
 
 0.991
G0RCN7_HYPJQ
Predicted protein.
   
 
 0.956
G0RAW2_HYPJQ
RRM domain-containing protein.
   
   0.952
G0RM76_HYPJQ
GTPase.
   
 
 0.945
G0REJ4_HYPJQ
Predicted protein; Belongs to the DEAD box helicase family.
   
 0.915
G0RJG4_HYPJQ
Nop domain-containing protein.
   
 0.888
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 0.886
G0RJI0_HYPJQ
Uncharacterized protein.
   
 0.868
G0RJD8_HYPJQ
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 0.866
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.