STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RDB4_HYPJQUncharacterized protein. (780 aa)    
Predicted Functional Partners:
G0R987_HYPJQ
Predicted protein.
   
 
 0.989
G0RB34_HYPJQ
Predicted protein.
   
 
 0.989
G0R752_HYPJQ
Predicted protein; Belongs to the DEAD box helicase family.
   
 0.988
G0R7K8_HYPJQ
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 0.987
G0RRY4_HYPJQ
Sas10 domain-containing protein.
   
 0.986
G0RGT0_HYPJQ
Uncharacterized protein.
  
0.985
G0RNT5_HYPJQ
Uncharacterized protein.
   
 0.984
G0RT66_HYPJQ
S4 RNA-binding domain-containing protein.
   
  0.984
G0RF58_HYPJQ
Uncharacterized protein.
 
 
 0.983
G0RJI0_HYPJQ
Uncharacterized protein.
  
 
0.982
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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