STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)    
Predicted Functional Partners:
rps29
Ribosomal protein S29, S14 family.
   
 0.999
rps22
Ribosomal protein S22, S8 family; Belongs to the universal ribosomal protein uS8 family.
   
 0.999
G0R7C9_HYPJQ
Uncharacterized protein.
   
 
 0.999
G0R7F2_HYPJQ
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 0.999
rpl39
Ribosomal protein L39e.
   
 0.999
G0R7R1_HYPJQ
Ribosomal_L2_C domain-containing protein.
   
 
 0.999
G0R8A1_HYPJQ
S10_plectin domain-containing protein.
   
 
 0.999
rps3
40s ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
G0RAG8_HYPJQ
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
rpl24
60S ribosomal protein L24.
   
 0.999
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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