STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RFF3_HYPJQPredicted protein. (156 aa)    
Predicted Functional Partners:
G0RQ12_HYPJQ
Predicted protein.
    
 0.924
G0RBR9_HYPJQ
Ubiquitin-activating enzyme; Belongs to the ubiquitin-activating E1 family.
   
 0.921
G0RQ20_HYPJQ
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.904
rpl40
Ubiquitin fusion protein.
   
 0.854
G0RFF2_HYPJQ
Predicted protein; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.836
G0RE41_HYPJQ
Predicted protein.
   
 0.834
G0RT55_HYPJQ
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
   
 0.834
G0RV88_HYPJQ
Predicted protein.
     
 0.819
G0RQL2_HYPJQ
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family.
     
0.777
ubi4
Polyubiquitin.
    
 0.774
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.