STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (305 aa)    
Predicted Functional Partners:
G0RGB2_HYPJQ
ARP2/3 complex 20 kDa subunit.
    
 
 0.939
G0RHL9_HYPJQ
Predicted protein.
 
      0.899
G0RAW8_HYPJQ
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.870
G0REL0_HYPJQ
Predicted protein.
   
 0.870
G0RH90_HYPJQ
Predicted protein.
   
 0.870
G0RI82_HYPJQ
Predicted protein.
    
 0.851
G0R9B1_HYPJQ
Uncharacterized protein.
    
 0.845
G0RD93_HYPJQ
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.845
G0RCU8_HYPJQ
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.841
G0RSN3_HYPJQ
Endonuclease.
   
 0.822
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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