STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cel1bGlycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family. (484 aa)    
Predicted Functional Partners:
G0RTZ5_HYPJQ
Galactose-6-phosphate isomerase.
  
 
 0.851
G0RI16_HYPJQ
Aldose-1-epimerase.
  
  
 0.716
gal10
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 0.716
cel3a
Glycoside hydrolase family 3.
      
 0.570
cel3c
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
      
 0.564
ubi4
Polyubiquitin.
    
 0.549
G0RIA0_HYPJQ
Predicted protein.
 
    
 0.510
xyn3
Endo-1,4-beta-xylanase 3; Glycoside hydrolase involved in the hydrolysis of xylan, a major plant cell wall hemicellulose made up of 1,4-beta-linked D- xylopyranose residues. Catalyzes the endohydrolysis of the main-chain 1,4-beta-glycosidic bonds connecting the xylose subunits yielding various xylooligosaccharides and xylose. Produces xylobiose and xylotriose as the main degradation products. Belongs to the glycosyl hydrolase 10 (cellulase F) family.
      
 0.509
G0R962_HYPJQ
Predicted protein.
 
      0.504
cel7a
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
   
  
 0.504
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.