STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RJ28_HYPJQPredicted protein. (364 aa)    
Predicted Functional Partners:
G0R8H7_HYPJQ
Translation elongation factor 3-like protein.
   
 
 0.994
G0RPJ6_HYPJQ
Uncharacterized protein.
   
 
 0.992
rps3
40s ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.981
G0RI11_HYPJQ
Ribosomal_S10 domain-containing protein.
   
 
 0.981
G0RK22_HYPJQ
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.980
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.978
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.977
rps23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.976
G0RDA0_HYPJQ
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.976
rla0
60S acidic ribosomal protein P0.
   
 
 0.976
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.