STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RKZ2_HYPJQPredicted protein. (1147 aa)    
Predicted Functional Partners:
G0RJT8_HYPJQ
Uncharacterized protein.
   
 
 0.937
G0RJC9_HYPJQ
Predicted protein.
   
 
 0.890
G0RD17_HYPJQ
BP28CT domain-containing protein.
   
 
 0.852
G0R996_HYPJQ
DRIM domain-containing protein.
   
  
 0.834
G0RX09_HYPJQ
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.830
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.827
G0RKZ5_HYPJQ
Predicted protein.
   
 
 0.814
G0RV06_HYPJQ
Predicted protein.
   
  
 0.814
G0RNJ8_HYPJQ
WD_REPEATS_REGION domain-containing protein.
   
    0.798
G0RVY7_HYPJQ
Predicted protein; Belongs to the DEAD box helicase family.
   
 
 0.788
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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