STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RTK2_HYPJQPredicted protein. (458 aa)    
Predicted Functional Partners:
G0RTA1_HYPJQ
Ribosomal_L16 domain-containing protein.
    
 
 0.993
G0RGD7_HYPJQ
Predicted protein.
 
      0.882
G0RTK1_HYPJQ
PHD-type domain-containing protein.
 
      0.798
G0RE65_HYPJQ
Predicted protein.
   
  
 0.741
G0RE79_HYPJQ
WD_REPEATS_REGION domain-containing protein.
   
  
 0.741
G0RAW1_HYPJQ
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.664
G0RS07_HYPJQ
Predicted protein.
    
 0.643
G0RJD8_HYPJQ
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.639
G0R6U0_HYPJQ
Predicted protein.
    
 
 0.616
G0R7A0_HYPJQ
Predicted protein.
    
 
 0.616
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.