STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G0RX65_HYPJQPredicted protein. (1023 aa)    
Predicted Functional Partners:
skp1
Predicted protein; Belongs to the SKP1 family.
    
 0.999
G0RJ60_HYPJQ
Predicted protein.
    
 0.997
G0RCK4_HYPJQ
Predicted protein.
    
 0.991
G0R9Y4_HYPJQ
Predicted protein; Belongs to the cullin family.
    
 0.986
G0RRZ9_HYPJQ
Uncharacterized protein.
  
  
 
0.909
G0RHN5_HYPJQ
Predicted protein.
    
 0.881
G0RBS5_HYPJQ
Predicted protein.
    
 0.872
G0RRP9_HYPJQ
Predicted protein.
    
 0.872
G0RXJ1_HYPJQ
Predicted protein; Belongs to the cullin family.
    
 0.807
ubi4
Polyubiquitin.
    
 0.767
Your Current Organism:
Trichoderma reesei
NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.