STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO25122.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)    
Predicted Functional Partners:
KHO25193.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.737
KHO18961.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.636
KHO25123.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
KHO25121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.576
KHO22064.1
Electron transfer flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.545
KHO19160.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.504
KHO18675.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
    0.458
KHO25119.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.424
KHO18546.1
Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.412
Your Current Organism:
Mycolicibacterium setense
NCBI taxonomy Id: 431269
Other names: CIP 109395, DSM 45070, JCM 15660, M. setense, Mycobacterium setense, Mycobacterium setense Lamy et al. 2008, Mycolicibacterium setense (Lamy et al. 2008) Gupta et al. 2018, strain ABO-M06
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