STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO23406.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)    
Predicted Functional Partners:
KHO21361.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.773
KHO21362.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.710
KHO17515.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.655
KHO25303.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.576
KHO25229.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.481
KHO19566.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.449
KHO18482.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
KHO18793.1
2-polyprenyl-6-methoxyphenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.435
KHO20654.1
Urease accessory protein UreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
KHO23407.1
Aminobenzoate oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.415
Your Current Organism:
Mycolicibacterium setense
NCBI taxonomy Id: 431269
Other names: CIP 109395, DSM 45070, JCM 15660, M. setense, Mycobacterium setense, Mycobacterium setense Lamy et al. 2008, Mycolicibacterium setense (Lamy et al. 2008) Gupta et al. 2018, strain ABO-M06
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