node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KHO25709.1 | rplI | QQ25_00695 | QQ25_00455 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.987 |
KHO25709.1 | rplR | QQ25_00695 | QQ25_07825 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
KHO25709.1 | rplU | QQ25_00695 | QQ25_20830 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
KHO25709.1 | rpmB | QQ25_00695 | QQ25_12470 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.995 |
KHO25709.1 | rpmE | QQ25_00695 | QQ25_22710 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.989 |
KHO25709.1 | rpmG | QQ25_00695 | QQ25_07300 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. | 0.993 |
KHO25709.1 | rpmI | QQ25_00695 | QQ25_18530 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. | 0.995 |
KHO25709.1 | rpsF | QQ25_00695 | QQ25_00470 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
KHO25709.1 | rpsL | QQ25_00695 | QQ25_07525 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.996 |
KHO25709.1 | rpsN | QQ25_00695 | QQ25_07810 | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.994 |
rplI | KHO25709.1 | QQ25_00455 | QQ25_00695 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
rplI | rplR | QQ25_00455 | QQ25_07825 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplI | rplU | QQ25_00455 | QQ25_20830 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.998 |
rplI | rpmB | QQ25_00455 | QQ25_12470 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.998 |
rplI | rpmE | QQ25_00455 | QQ25_22710 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.984 |
rplI | rpmG | QQ25_00455 | QQ25_07300 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. | 0.995 |
rplI | rpmI | QQ25_00455 | QQ25_18530 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. | 0.993 |
rplI | rpsF | QQ25_00455 | QQ25_00470 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplI | rpsL | QQ25_00455 | QQ25_07525 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.995 |
rplI | rpsN | QQ25_00455 | QQ25_07810 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.995 |