STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO19608.1Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (396 aa)    
Predicted Functional Partners:
KHO17515.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.973
KHO25229.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.948
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.813
KHO21940.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.791
KHO17870.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.791
KHO17513.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.784
KHO22064.1
Electron transfer flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.725
KHO19566.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.680
KHO23626.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.658
KHO20758.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.619
Your Current Organism:
Mycolicibacterium setense
NCBI taxonomy Id: 431269
Other names: CIP 109395, DSM 45070, JCM 15660, M. setense, Mycobacterium setense, Mycobacterium setense Lamy et al. 2008, Mycolicibacterium setense (Lamy et al. 2008) Gupta et al. 2018, strain ABO-M06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.