STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO17888.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)    
Predicted Functional Partners:
KHO17887.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.978
KHO18267.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.912
KHO17886.1
beta-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.886
KHO17838.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
KHO21202.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.769
KHO17885.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.761
KHO17911.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
KHO21362.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.744
KHO17855.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.743
KHO17716.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.738
Your Current Organism:
Mycolicibacterium setense
NCBI taxonomy Id: 431269
Other names: CIP 109395, DSM 45070, JCM 15660, M. setense, Mycobacterium setense, Mycobacterium setense Lamy et al. 2008, Mycolicibacterium setense (Lamy et al. 2008) Gupta et al. 2018, strain ABO-M06
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