STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO18056.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (67 aa)    
Predicted Functional Partners:
KHO18057.1
Pilus assembly protein TadC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.938
KHO18059.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.925
KHO18060.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.915
KHO18058.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.892
KHO18055.1
Pilus biosynthesis protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.732
KHO18208.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
KHO18054.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.607
KHO21563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
KHO23422.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
KHO17615.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
Your Current Organism:
Mycolicibacterium setense
NCBI taxonomy Id: 431269
Other names: CIP 109395, DSM 45070, JCM 15660, M. setense, Mycobacterium setense, Mycobacterium setense Lamy et al. 2008, Mycolicibacterium setense (Lamy et al. 2008) Gupta et al. 2018, strain ABO-M06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.