STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metQYaeC family lipoprotein; Belongs to the nlpA lipoprotein family. (271 aa)    
Predicted Functional Partners:
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 0.999
metI
Binding-protein-dependent transport systems inner membrane component.
 0.999
nodQ
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate.
   
    0.739
AGA_1949
Polar amino acid transport system substrate-binding protein; Extracellular solute-binding protein, family 3.
 
 
 0.583
AGA_285
Polar amino acid transport system substrate-binding protein.
  
 
 0.505
metK
S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family.
   
  
 0.463
AGA_1015
D-lactate dehydrogenase (EC:1.1.1.28), FAD-linked oxidase, C-terminal.
       0.454
metF
Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.431
gltD
Glutamate synthase (NADPH/NADH) small chain; [EC:1.4.1.13 1.4.1.14].
   
    0.422
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
  
 0.412
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.