Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA_1113Protein of unknown function DUF1058. (332 aa)    
Predicted Functional Partners:
pykA
Pyruvate kinase, barrel; Belongs to the pyruvate kinase family.
       0.783
AGA_412
Hypothetical protein; COG: Inactivated superfamily I helicase.
  
     0.674
AGA_251
COG: Uncharacterized protein conserved in bacteria.
  
     0.668
AGA_636
Hypothetical protein; GcrA cell cycle regulator.
  
     0.662
AGA_2247
Protein of unknown function DUF2312; Belongs to the UPF0335 family.
  
     0.647
AGA_867
Protein of unknown function DUF2312; Belongs to the UPF0335 family.
  
     0.637
AGA_1115
Gluconolactonase; SMP-30/Gluconolaconase/LRE-like region.
       0.615
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.606
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.598
moeB
UBA/ThiF-type NAD/FAD binding protein.
       0.586
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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