STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_1115Gluconolactonase; SMP-30/Gluconolaconase/LRE-like region. (426 aa)    
Predicted Functional Partners:
gcd
Quinoprotein glucose dehydrogenase; PQQ-dependent enzyme, N-terminal.
  
  
 0.905
gntK
Gluconokinase; Shikimate kinase.
    
 0.881
AGA_1038
[EC:1.1.99.3]; gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3), FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.877
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
  0.739
gcd-4
Quinate dehydrogenase (pyrroloquinoline-quinone).
  
  
 0.732
gcd-2
Quinoprotein glucose dehydrogenase; PQQ-dependent enzyme, N-terminal.
  
  
 0.717
gcd-3
Quinoprotein glucose dehydrogenase; PQQ-dependent enzyme, N-terminal.
  
  
 0.716
AGA_1039
Gluconate 2-dehydrogenase gamma chain; [EC:1.1.99.3]; hypothetical protein.
     
 0.678
tkrA
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
   
 
 0.670
pykA
Pyruvate kinase, barrel; Belongs to the pyruvate kinase family.
     
 0.662
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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