STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_1209Hypothetical protein; COG: Predicted SAM-dependent methyltransferase. (320 aa)    
Predicted Functional Partners:
AGA_1210
Protein of unknown function DUF423.
 
  
 0.924
AGA_2335
TPR repeat-containing protein; Tetratricopeptide TPR-1.
 
     0.585
AGA_1211
Adenosylcobalamin-dependent diol dehydratase gamma subunit; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.572
AGA_757
Hypothetical protein.
  
     0.475
AGA_1212
Hypothetical protein predicted by Glimmer/Critica.
       0.460
AGA_1112
Hypothetical protein.
  
     0.459
AGA_2145
Phytoene synthase.
  
     0.455
AGA_1539
Hypothetical protein.
  
     0.450
AGA_1416
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
     0.445
AGA_954
Hypothetical protein.
  
     0.443
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.