STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_1266Hypothetical protein. (343 aa)    
Predicted Functional Partners:
AGA_1307
Hypothetical protein.
  
     0.764
AGA_1224
Hypothetical protein; COG: NAD-dependent aldehyde dehydrogenases.
  
     0.745
AGA_2090
Putative 4-amino-4-deoxy-L-arabinose transferase.
  
     0.715
AGA_1562
Hypothetical protein.
  
     0.709
AGA_213
Protein of unknown function DUF330.
  
     0.708
AGA_959
Hypothetical protein.
  
     0.707
AGA_1429
Hypothetical protein.
  
     0.680
AGA_2253
Hypothetical protein.
  
     0.680
AGA_1342
Hypothetical protein.
  
     0.662
AGA_2392
Hypothetical protein.
  
     0.644
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.