STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pqiBHypothetical protein; Mammalian cell entry related. (304 aa)    
Predicted Functional Partners:
AGA_125
Protein of unknown function DUF140.
 
 0.996
AGA_126
ABC transporter related.
 
 0.996
AGA_1339
Protein of unknown function DUF140.
  
 0.965
mkl
Sulfate ABC transporter, ATP-binding protein.
  
 0.960
AGA_2534
Hypothetical protein; Toluene tolerance.
  
 0.959
AGA_1196
Protein of unknown function DUF140.
   
 0.957
AGA_737
Toluene tolerance.
  
 0.954
AGA_128
Protein of unknown function DUF330.
 
     0.931
AGA_1341
Hypothetical protein; Mammalian cell entry related.
  
  
  0.904
AGA_1608
Hypothetical protein; Mammalian cell entry related.
  
  
  0.890
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.