Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA_1367COG: Predicted membrane protein. (1062 aa)    
Predicted Functional Partners:
asmA
Hypothetical protein; AsmA.
  
   
 0.757
AGA_1184
Hypothetical protein; Organic solvent tolerance-like, N-terminal.
  
     0.740
AGA_1185
Hypothetical protein; Lipopolysccharide-assembly, LptC-related.
  
     0.734
AGA_959
Hypothetical protein.
  
     0.731
AGA_1244
Hypothetical protein.
  
     0.728
AGA_1317
Hypothetical protein; COG: Chromosome segregation ATPases.
  
     0.705
glnE
Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]
 
     0.697
ompH
Outer membrane chaperone Skp (OmpH).
  
     0.688
AGA_1307
Hypothetical protein.
  
     0.677
fusB-6
Fusaric acid resistance protein, conserved region.
  
     0.664
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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