STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_137Hypothetical protein. (220 aa)    
Predicted Functional Partners:
AGA_135
Putative flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.909
fliM
Flagellar motor switch protein FliM.
 
     0.879
AGA_143
Hypothetical protein.
 
     0.826
AGA_197
Hypothetical protein.
 
     0.817
flgA
Flagella basal body P-ring formation protein FlgA.
 
     0.808
flgL
Flagellar hook-associated protein 3 FlgL.
  
     0.764
AGA_160
Hypothetical protein.
  
     0.748
cheL
Flagellar protein FlgJ, N-terminal.
  
     0.715
AGA_2508
Hypothetical protein.
  
     0.715
AGA_786
Hypothetical protein.
  
     0.701
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.