STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_143Hypothetical protein. (945 aa)    
Predicted Functional Partners:
AGA_197
Hypothetical protein.
 
   
 0.817
AGA_137
Hypothetical protein.
 
     0.812
flgA
Flagella basal body P-ring formation protein FlgA.
 
     0.811
AGA_135
Putative flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.793
fliE
Flagellar hook-basal body complex protein FliE.
 
 
   0.783
flgL
Flagellar hook-associated protein 3 FlgL.
  
 
   0.778
AGA_144
Hypothetical protein predicted by Glimmer/Critica.
       0.773
AGA_130
Glycosyl transferase, family 25.
  
     0.772
AGA_160
Hypothetical protein.
  
     0.740
AGA_1099
WD-40 repeat-containing protein.
    
  0.726
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.