STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_1446Peptidase M23. (442 aa)    
Predicted Functional Partners:
ftsX
COG: Cell division protein.
 
 
 
 0.929
amiA
N-acetylmuramoyl-L-alanine amidase.
 
 
   0.893
cckA
Sensory box histidine kinase/response regulator; ATPase-like, ATP-binding domain.
     
  0.878
ftsE
Cell division transport system ATP-binding protein; ABC transporter-like.
   
 
 0.862
AGA_1445
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
 
  
 0.784
AGA_2527
TPR repeat-containing protein.
 
 
   0.782
AGA_725
Hypothetical protein; Tetratricopeptide TPR-1.
   
   0.731
AGA_1488
PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain.
     
  0.730
gpm
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.631
dos-2
Sensory box protein.
     
  0.617
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.