Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGA_1488 | AGA_2329 | AGA_1488 | AGA_2329 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | 0.930 |
| AGA_1488 | cckA | AGA_1488 | AGA_574 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Sensory box histidine kinase/response regulator; ATPase-like, ATP-binding domain. | 0.999 |
| AGA_1488 | ctrA | AGA_1488 | AGA_146 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Two component transcriptional regulator, winged helix family; Signal transduction response regulator, C-terminal. | 0.986 |
| AGA_1488 | ctrA-2 | AGA_1488 | AGA_414 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Two-component system, cell cycle response regulator CtrA. | 0.988 |
| AGA_1488 | dos-2 | AGA_1488 | AGA_642 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Sensory box protein. | 0.999 |
| AGA_1488 | mtrA | AGA_1488 | AGA_1818 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Two component transcriptional regulator; Signal transduction response regulator, receiver domain. | 0.987 |
| AGA_1488 | ompR | AGA_1488 | AGA_2109 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Two component transcriptional regulator; Signal transduction response regulator, receiver domain. | 0.985 |
| AGA_1488 | phoR | AGA_1488 | AGA_831 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. | 0.950 |
| AGA_1488 | pleD | AGA_1488 | AGA_2173 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Hypothetical protein; Diguanylate cyclase, predicted. | 0.989 |
| AGA_1488 | ragB | AGA_1488 | AGA_1374 | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | Integral membrane sensor signal transduction histidine kinase. | 0.935 |
| AGA_2329 | AGA_1488 | AGA_2329 | AGA_1488 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | 0.930 |
| AGA_2329 | cckA | AGA_2329 | AGA_574 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | Sensory box histidine kinase/response regulator; ATPase-like, ATP-binding domain. | 0.710 |
| AGA_2329 | ctrA | AGA_2329 | AGA_146 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | Two component transcriptional regulator, winged helix family; Signal transduction response regulator, C-terminal. | 0.744 |
| AGA_2329 | ctrA-2 | AGA_2329 | AGA_414 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | Two-component system, cell cycle response regulator CtrA. | 0.747 |
| AGA_2329 | dos-2 | AGA_2329 | AGA_642 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | Sensory box protein. | 0.705 |
| AGA_2329 | mtrA | AGA_2329 | AGA_1818 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | Two component transcriptional regulator; Signal transduction response regulator, receiver domain. | 0.810 |
| AGA_2329 | ompR | AGA_2329 | AGA_2109 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | Two component transcriptional regulator; Signal transduction response regulator, receiver domain. | 0.805 |
| AGA_2329 | pleD | AGA_2329 | AGA_2173 | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | Hypothetical protein; Diguanylate cyclase, predicted. | 0.726 |
| cckA | AGA_1488 | AGA_574 | AGA_1488 | Sensory box histidine kinase/response regulator; ATPase-like, ATP-binding domain. | PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain. | 0.999 |
| cckA | AGA_2329 | AGA_574 | AGA_2329 | Sensory box histidine kinase/response regulator; ATPase-like, ATP-binding domain. | Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain. | 0.710 |
page 1 of 5