STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_171Hypothetical protein; COG: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (317 aa)    
Predicted Functional Partners:
flgB
Flagellar basal-body rod protein FlgB.
 
    0.751
flgF
Protein of unknown function DUF1217.
  
   0.659
flgA
Flagella basal body P-ring formation protein FlgA.
  
    0.648
motA
Flagellar motor protein MotA.
 
    0.637
AGA_197
Hypothetical protein.
 
    0.613
flgI
Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
    0.584
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.584
AGA_203
Flagellar hook-associated protein 1 FlgK.
 
    0.575
AGA_137
Hypothetical protein.
  
     0.524
AGA_170
Hypothetical protein predicted by Glimmer/Critica.
       0.512
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.