STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_1854Alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (265 aa)    
Predicted Functional Partners:
AGA_1856
LysR family transcriptional regulator; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
 
     0.849
AGA_1861
Rhodanese domain-containing protein; Rhodanese-like.
 
  
 0.702
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.650
ssuD
Alkanesulfonate monooxygenase.
 
     0.616
AGA_1858
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
 
     0.602
cdo
Cysteine dioxygenase type I.
 
     0.601
AGA_1859
Hypothetical protein; Class II aldolase/adducin, N-terminal.
 
     0.523
ribD
[EC:3.5.4.26 1.1.1.193].
     
 0.494
hmp
Nitric oxide dioxygenase; Belongs to the globin family.
      
 0.404
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.