STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGA_1966Acid phosphatase (class A). (256 aa)    
Predicted Functional Partners:
appA
4-phytase / acid phosphatase; [EC:3.1.3.26 3.1.3.2].
  
  
  0.924
AGA_2416
Unnamed protein product; Belongs to the cytochrome P450 family.
   
 0.884
ribF
Riboflavin kinase / FMN adenylyltransferase; Riboflavin kinase RibF; Belongs to the ribF family.
     
  0.868
ribE
Riboflavin synthase subunit alpha.
     
  0.868
rplF
Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.867
tonB
TonB-dependent receptor.
  
     0.703
AGA_2014
fatty-acyl-CoA synthase.
    
  0.701
AGA_2015
fatty-acyl-CoA synthase.
    
  0.701
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
 
 0.659
AGA_2585
TonB-dependent receptor.
 
     0.644
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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