STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgAFlagella basal body P-ring formation protein FlgA. (340 aa)    
Predicted Functional Partners:
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.993
flgG
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
  
  
 0.985
fliM
Flagellar motor switch protein FliM.
 
  
 0.984
AGA_135
Putative flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.982
flgB
Flagellar basal-body rod protein FlgB.
 
  
 0.981
AGA_203
Flagellar hook-associated protein 1 FlgK.
 
  
 0.980
fliE
Flagellar hook-basal body complex protein FliE.
 
  
 0.977
cheL
Flagellar protein FlgJ, N-terminal.
 
  
 0.977
flgD
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.976
AGA_197
Hypothetical protein.
 
    0.967
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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