STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_2019Hypothetical protein; Diacylglycerol kinase, catalytic domain. (326 aa)    
Predicted Functional Partners:
AGA_2023
Fatty acid hydroxylase.
 
 
 0.939
AGA_2018
Hypothetical protein.
 
     0.937
AGA_2024
Hypothetical protein; COG: CMP-2-keto-3-deoxyoctulosonic acid synthetase.
 
     0.916
AGA_2021
Hypothetical protein; Permease YjgP/YjgQ, predicted.
 
     0.881
AGA_2020
Metallophosphoesterase.
 
  
  0.880
AGA_2022
Permease YjgP/YjgQ family protein.
 
     0.876
AGA_1923
Hypothetical protein.
 
     0.793
AGA_2014
fatty-acyl-CoA synthase.
  
     0.773
AGA_2016
Acyl carrier protein; Phosphopantetheine-binding.
  
     0.767
AGA_2234
Hypothetical protein; CDP-glycerol glycerophosphotransferase.
  
     0.765
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.